Paper co-authored by Professor Nakaoka has been published in Ecological Informatics

January 16, 2026

A paper co-authored by Professor Shinji Nakaoka of Hokkaido University’s Faculty of Advanced Life Science has been published in Ecological Informatics.

  • Ishara Uhanie Perera, So Fujiyoshi, Daiki Kumakura, Carolina Medel, Kyoko Yarimizu, Osvaldo Artal, Pablo Reche, Oscar Espinoza-González, Leonardo Guzman, Felipe Tucca, Alexander Jaramillo-Torres, Jacquelinne J. Acuña, Milko A. Jorquera, Shinji Nakaoka, Satoshi Nagai, Fumito Maruyama. A prototype coupled modeling approach for predicting harmful algal blooms: A case study in Chile. Ecological Informatics, 2026, Vol. 94, 103615.
    DOI: https://doi.org/10.1016/j.ecoinf.2026.103615

Abstract

Predicting harmful algal blooms (HABs) remains a major challenge for coastal management and aquaculture. This study compares three forecasting approaches developed under the Monitoring of Algae in Chile (MACH) project: a particle dispersion model, an LSTM neural network, and an empirical dynamic model (EDM) to evaluate their ability to forecast bloom events. Consequently, we applied the EDM to forecast two Pseudo-nitzschia species groups using data collected from Metri, Quellón, and Melinka in southern Chile. The results showed that the genus Ceratium and Leptocylindrus were commonly associated with both Pseudo-nitzschia species groups, and the best prediction by causal species was obtained for the P. seriata group, with a correlation coefficient of 0.733 (P < 0.0001) between observed and predicted values. This case study demonstrated that species interactions can be used to predict specific HAB species; however, the prediction performance may vary depending on location and species. This study provides one of the first applications of EDM for HAB forecasting using causal species in a real-world monitoring context, demonstrating the potential of hybrid modeling frameworks to improve early warning systems and mitigate aquaculture losses.

Keywords

Bloom forecasting; Empirical dynamic modeling; Nonlinear time-series analysis; Pseudo-nitzschia; Causal species

Credit: Perera et al., Ecological Informatics, 94, 103615 (2026), https://doi.org/10.1016/j.ecoinf.2026.103615. © 2026 The Authors. Licensed under CC BY-NC-ND 4.0.